Clustal Omega 1.2.4
mbed.h
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1/*********************************************************************
2 * Clustal Omega - Multiple sequence alignment
3 *
4 * Copyright (C) 2010 University College Dublin
5 *
6 * Clustal-Omega is free software; you can redistribute it and/or
7 * modify it under the terms of the GNU General Public License as
8 * published by the Free Software Foundation; either version 2 of the
9 * License, or (at your option) any later version.
10 *
11 * This file is part of Clustal-Omega.
12 *
13 ********************************************************************/
14
15/*
16 * RCS $Id: mbed.h 278 2013-05-16 15:53:45Z fabian $
17 */
18
19#ifndef CLUSTALO_MBED_H
20#define CLUSTALO_MBED_H
21
22#include "muscle_tree.h"
23#include "seq.h"
24
25
26extern int
27Mbed(tree_t **tree, mseq_t *prMSeq,
28 const int iPairDistType, const char *pcGuidetreeOutfile,
29 int iClustersizes, const char *pcClusterFile);
30
31#endif
int Mbed(tree_t **tree, mseq_t *prMSeq, const int iPairDistType, const char *pcGuidetreeOutfile, int iClustersizes, const char *pcClusterFile)
From scratch reimplementation of mBed: Blackshields et al. (2010); PMID 20470396.
Definition mbed.c:1162
structure for storing multiple sequences
Definition seq.h:47
guide-tree structure
Definition muscle_tree.h:59